Did you turn on the "Group by Slot" item in the Shooting Schedule window?
When "Group by Slot" is turned on, ASIAIR should finish all the frames that correspond to one event before going on to process the next event. Otherwise it simply cycles through the events, one event after another event.
For example, by how you select "Group by Slot", you can either do "1 sec, 1 sec 1 sec, 10 sec, 10 sec 10 sec" or do "1 sec, 10 sec, 1 sec, 10 sec, 1 sec, 10 sec" if the two events have exposure times of 1 sec and 10 sec and each event has a repeat count of 3.
Presumably, this might change in a future software release when they allow you to select multiple targets. Keep checking the release logs that come with each firmware release.
Chen