I have been using Firecapture since Torsten first released it and had no problems stacking. I have used other cameras in the past, bu the current set of ASI290MM and 160MM are the primary ones in use now using Lunt Ha/CaK/WL and Daystar Quantum filters and Had no issues.
I use Autotskkert and Regisitax for some stacking, but most stacking is done with AviStack 2(use the others when it fails). Just looking at the sample images I have a gut feeling that there is a setting/settings off that is tripping the stacking software up. Just my thoughts on it.
Hope yo can get it working better for your images.
Just an example of full disk from this past Sunday:

Brian