The Seestar unit is two components. The main unit which rotates on its base (azimuth) and the secondary unit with the scope itself which tilts up and down (altitude). Both altitude and azimuth have some gear lash, but altitude is more than 1/2 degrees (more than the diameter of the moon).
The secondary unit is not perfectly balanced fore/aft so when shooting at lower angles it tends to rest on one side of the gear teeth, especially when you add a dew shield which makes it a little more nose heavy.
But what I've found is that the secondary unit is almost perfectly balanced when it's pointed close to straight up, and this causes it to just flop around between the teeth. I kept finding star trails in some of my EQ shots, and random stacking failures, and when I'd stop stacking the subject wasn't even close to centered. Would be way at the top or way at the bottom of the screen. Remember, it doesn't stop tracking when you stop stacking. Can point it up at something bright enough to see live (like M15 star cluster) and then just gently touch the secondary unit on one side of the other and feel and see it flop back and forth.
Anyway, I'm testing a workaround. I've taped a couple small lead weights on top of the scope in the hopes that it'll unbalance it enough that it'll stay resting lightly against the teeth on one side instead of wandering between them. In hindsight occurs to me that I should put em on the bottom, as the way I have it, at some point as I lower the altitude angle, it'll find a new balance point.
Note also that since the default calibration points for EQ mode are straight up, this could/should affect them as well.
It most definitely could seriously throw everything off if there's even a tiny bit of wind. I'm shooting in zero wind conditions right now, and still saw it in the live view though.