A very small window opened few days ago, so i did another trial.
My Polar alignment:

Nonrejected pictures - 30s exposures blink
9:31PM - 11PM - so hour and a half and clouds came but alnitak was still visible so i kept it running.
I would assume backlash would settle, but seems like it did not and i had dithering on.
I will also try to turn off the dithering next time as the way it "wanders" maybe not another dithering is needed ? :-)
I know from my past short time with iExos-100 and 400m lens, that tracking is affected by the target declination, but i wasn't expecting so much issue with the Seestar S50.
I had no chance to try it without 3.0.0+ updates as I have unknowingly updated it right after unpacking. :-(